CVEvulnerability

CVE-2026-31965

6.9 MEDIUM Published 2026-03-18 Modified 2026-06-17 Official page ↗
Status
Analyzed
Published
2026-03-18
Last modified
2026-06-17
Assigner
[email protected]
CVSS 4.0 ([email protected])
6.9 MEDIUM — CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:N/VC:L/VI:N/VA:L/SC:N/SI:N/SA:N/E:X/CR:X/IR:X/AR:X/MAV:X/MAC:X/MAT:X/MPR:X/MUI:X/MVC:X/MVI:X/MVA:X/MSC:X/MSI:X/MSA:X/S:X/AU:X/R:X/V:X/RE:X/U:X
CVSS 3.1 ([email protected])
8.2 HIGH — CVSS:3.1/AV:N/AC:L/PR:N/UI:N/S:U/C:L/I:N/A:H
Weaknesses
CWE-125, CWE-129

Description

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. In the `cram_decode_slice()` function called while reading CRAM records, validation of the reference id field occurred too late, allowing two out of bounds reads to occur before the invalid data was detected. The bug does allow two values to be leaked to the caller, however as the function reports an error it may be difficult to exploit them. It is also possible that the program will crash due to trying to access invalid memory. Versions 1.23.1, 1.22.2 and 1.21.1 include fixes for this issue. There is no workaround for this issue.

Affected configurations

• htslib htslib (< 1.21.1) • htslib htslib (>= 1.22 < 1.22.2) • htslib htslib 1.23

Related

Weakness · CWE (2)

  • CWE-125 Out-of-bounds Read weakness
  • CWE-129 Improper Validation of Array Index weakness

References